Imaging prostate tissue lipids using isomer-resolved mass spectrometry
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Data sets associated with the main text figures and supplementary information for the Fronteirs in Endocrinology publication "Isomer-Resolved Imaging of Prostate Cancer Tissues Reveals Specific Lipid Unsaturation Profiles Associated With Lymphocytes and Abnormal Prostate Epithelia".
Data has been divided into primary folders, with labels referring to the relevant main/SI figure. Data folders will include raw data files generated by the analytical instruments (see METHODS section within the publication for more information), text files of specific data extracts, and image file types for microscopy and MALDI-MSI.
Geographical area of data collection
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1) QUT - Gardens Point Campus, P Block, Brisbane City, QLD 4000, Australia.
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3) Universiteitssingel - 50, 6229 ER Maastricht, Netherlands.
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2) TRI Princess Alexandra Hospital, Brisbane, QLD 4000, Australia.
Publications
Tousignant, Kaylyn D, Rockstroh, Anja, Poad, Berwyck L J, Talebi, Ali, Young, Reuben S E, Taherian Fard, Atefeh, Gupta, Rajesh, Zang, Tuo, Wang, Chenwei, Lehman, Melanie L, Swinnen, Johan V, Blanksby, Stephen J, Nelson, Colleen C, & Sadowski, Martin C (2020) Therapy-induced lipid uptake and remodeling underpin ferroptosis hypersensitivity in prostate cancer. Cancer & Metabolism, 8, Article number: 11.
https://eprints.qut.edu.au/202211/
Paine, Martin, Poad, Berwyck, Eijkel, Gert, Marshall, David, Blanksby, Stephen, Heeren, Ron, & Ellis, Shane (2018) Mass spectrometry imaging with isomeric resolution enabled by ozone-induced dissociation. Angewandte Chemie (International Edition), 57(33), pp. 10524-10530.
https://eprints.qut.edu.au/120319/
Young, Reuben S.E., Bowman, Andrew P., Williams, Elizabeth D., Tousignant, Kaylyn D., Bidgood, Charles L., Narreddula, Venkateswara R., Gupta, Rajesh, Marshall, David L., Poad, Berwyck L.J., Nelson, Colleen C., Ellis, Shane R., Heeren, Ron M.A., Sadowski, Martin C., & Blanksby, Stephen J. (2021) Apocryphal FADS2 activity promotes fatty acid diversification in cancer. Cell Reports, 34(6), Article number: 108738.
https://eprints.qut.edu.au/208094/
Poad, Berwyck, Marshall, David, Harazim, Eva, Gupta, Raj, Narreddula, Venkateswara Reddy, Young, Reuben, Duchoslav, Eva, Campbell, J., Broadbent, James, Cvacka, Josef, Mitchell, Todd, & Blanksby, Stephen (2019) Combining charge-switch derivatization with ozone-induced dissociation for fatty acid analysis. Journal of the American Society for Mass Spectrometry, 30(10), pp. 2135-2143.
https://eprints.qut.edu.au/131340/
Marshall, David, Criscuolo, Angela, Young, Reuben, Poad, Berwyck, Zeller, Martin, Reid, Gavin, Mitchell, Todd, & Blanksby, Stephen (2019) Mapping unsaturation in human plasma lipids by data-independent ozone-induced dissociation. Journal of the American Society for Mass Spectrometry, 30(9), pp. 1621-1630.
https://eprints.qut.edu.au/130909/
Research areas
Isomer elucidation
MALDI-MSI
Lipidomics
Ozone-induced Dissociation
Cell Biology
Mass Spectrometry
Molecular Imaging
Prostate cancer
Cite this collection
Young, Reuben; Claes, Britt; Bowman, Andrew; Williams, Elizabeth; Shepherd, Benjamin; Perren, Aurel; Poad, Berwyck; Ellis, Shane; Heeren, Ron; Sadowski, Martin; Blanksby, Stephen; (2021): Imaging prostate tissue lipids using isomer-resolved mass spectrometry. Queensland University of Technology. (Collection) https://doi.org/10.25912/RDF_1625715878910
Partner institution
Translational Research Institute Australia
https://www.tri.edu.au/translational-research-institute-australia
Maastricht MultiModal Molecular Imaging (M4I)
https://www.maastrichtuniversity.nl/research/m4i-division-imaging-mass-spectrometry
Data file types
Mass spec instrument files (.raw file folders) - to be used with Waters HDI or MassLynx software
.txt files (tab delineated) with extracted data
.fig files to be used with MatLab
Image files (.png, .tif)
Licence
Creative Commons Attribution-NonCommercial-Share Alike 4.0 (CC-BY-NC-SA)
http://creativecommons.org/licenses/by-nc-sa/4.0/
Copyright
© Reuben S. E. Young, 2021.
Dates of data collection
From 2019-06-06 to 2021-06-18
Connections
Has association with
Has chief investigator
Contacts
Name: Mr Reuben Young
Email: r22.young@qut.edu.au
Other
Date record created:
2021-07-07T13:34:47
Date record modified:
2021-11-25T12:36:58
Record status:
Published - Open Access